Yay! We have finished our first expedition of the parasitoid Chalcid wasps in Magnified, beating the ETC by 4 days! I reckon that Friday the 13th is a lucky day after all.
An especially big thank-you goes out to @maggiej , @reinheitscat , @dfreezor , @Sagaman , @HDumas , @RedBee , @stevenhm , @rgerman , and @Mikusan who have all been particularly prolific in helping us to transcribe these microscopic slide labels – but of course many more people than can be mentioned have also generously donated their time to us. We thank you ALL.
And we know it wasn’t easy.
Laurence and Natalie and I at the Natural History Museum in London have been taking a look at the data that you have transcribed for us, and we can see that it often wasn’t clear what the difference was between the Species or Genus name of the Chalcid itself, the host insect it was found on, and the host plant they were both found on. We’ve got some thoughts on how we might make that both easier and more clear, so please bear with us while we take a few days to prepare for the Chalcids #2 expedition.
If you have any suggestions for us on how to structure or explain the fields we are asking you to fill, and how to provide better examples, please do drop us a note in the Magnified section of Talk. It is hugely helpful to us to receive your feedback.
In the meantime, I leave you with this beautiful image of a ‘Fairyfly’ – one of the Chalcid wasp families.
For all of you who have been helping us transcribe all of these specimen labels, I thought you might enjoy hearing from my boss (Vince Smith, who leads the Informatics team) and our Head of Life Sciences (Ian Owen) at the Natural History Museum in London, in their talk about how digitising the Museum’s 80 million specimens will help scientists answer big questions about how human behaviour is affecting life on earth. – See more at: http://www.nhm.ac.uk/our-science/our-work/digital-museum.html#sthash.sqMZkeaN.dpuf
I’m sure that many of you around the world are as big a fan as we are of David Attenborough here in England, and we hope that the new series of Planet Earth is reaching you where you are as well. (If not, we do encourage you to buy the DVD the second it comes out!)
If you watched the first episode, then you will have learned of the plight of the red crabs native to Christmas Island, and how they are being decimated by an invasive species of ant.
Well, we’re pleased to tell you that this marvelous creature in the image below is coming to the rescue!
Have you heard the one about the wasp that kills the bug that feeds the ants that kill the crabs that keep the forests healthy on Christmas Island?
If not, that’s because it hasn’t happened yet, but it is a tale worth telling.
In the coming weeks, Parks Australia will release a 2mm wasp on Christmas Island to control the island’s yellow crazy ant infestation. Crazy ants are a big threat to the island’s wildlife, including its famous red crabs.
Biological control – when we use one species to control another – is infamous for giving Australia its cane toad invasion. So, how do we know this one will work?
Read more about how A Tiny Wasp Could Save Christmas Island’s Spectacular Red Crabs from Crazy Ants.
Here on Notes from Nature, we have an entire collection of these marvelous microscopic parasitoid wasps – containing much valuable information for researchers around the world, with many more potential ‘biological control’ applications yet to be uncovered.
Help us set that information free, in our Magnified expedition: The Killer Within: Wasps, but not as you know them.
A huge thank-you to everyone who has been helping us transcribe the Parasitoid Wasp “Killer Within” specimen labels, in the ‘Miniature Lives Magnified’ section – they can sometimes be quite tricky, but you are doing work that will aid many future discoveries. This first set of slides is now 84% complete, and it would be awesome to finish those before the end of the year, if anyone is up for a final push!
But in the meantime, we’d like to share some exciting research with you, that Dr Gavin Broad, Principal Curator of Hymenoptera at the Natural History Museum has just co-authored. Together with his collaborator Dr Simon van Noort, Curator of Entomology at Iziko South African Museum, they have identified three new species of parasitoid wasps – two of which were laying undescribed in our own collections!!
All three species belong to the genus Genaemirum, which is found across Kenya, Tanzania, Uganda and South Africa. The finds bring the total number of species in the genus to eight – and offer more clues to the genus’ biology, which is poorly understood.
Deadly dinner guests
Parasitoid wasps lay their eggs in or on a host animal, eventually killing it when the larvae hatch and eat their host. This lifestyle has seen some parasitoid wasp species used as pest control, particularly if the hosts cause destruction to economically important crops.
Their fatal effect on the host also distinguishes parasitoids from parasites, which live off a host but don’t usually kill them.
‘Until now, we knew almost nothing about the biology of Genaemirum species,’ says Dr Gavin Broad, Principal Curator of Hymenoptera at the Museum, and a co-author of the research. ‘They were first described in 1936, but since then we’ve only been able to guess at the hosts that they parasitise.’
However, one of these three new species, G. phagocossorum, was reared from a log infested by the cossid moth Coryphodema tristis.
‘This suggests that members of the Genaemirum genus live on wood-boring moths – something that was suggested, but never confirmed, as long ago as 1967,’ says Dr Broad.
‘It’s exciting to think that these specimens could finally help us answer that 80-year-old question.’
It’s not just the mystery of its host species that has made Genaemirum an interesting genus to study.
‘They have the most extraordinary head structures,’ says Dr Broad. ‘Gerd Heinrich, who originally described the genus, characterised them as “monstrous”.
‘In fact, one of the species we found in the Museum’s collections has the most extreme head I’ve ever seen.
‘It has massively expanded genae, or “cheeks”, a long lower face and horns above the antennae. We named it G. phacochoerus, after the genus name for the warthog, because of its striking appearance.’
This unusual head shape lends weight to the suggestion that the genus parasitises wood borers, according to Dr Broad.
‘It looks like the female’s head has developed into a shovel shape,’ he explains. ‘This could help her shovel her way through piles of frass – the waste produced by the moth larvae as they bore through the wood – to get to a host for her eggs.’
The hunt for answers isn’t finished yet, however. The research, a collaboration with Dr Simon van Noort, Curator of Entomology at Iziko South African Museum, is part of ongoing efforts to document African parasitoid wasps in the family Ichneumonidae.
‘If we had a male G. phacochoerus specimen to compare to the female, that would tell us even more,’ says Dr Broad. ‘The shape of its head could support or refute the wood-borer host theory, since males don’t need to access a host.’
‘But for now, we’re one step closer to understanding these strange species.’
Read the full news story on the Natural History Museum website: http://www.nhm.ac.uk/our-science/science-news/2016/december/monstrous-wasps-could-reveal-their-species-secrets.html
There has been a flurry of activity at Notes from Nature these past few days, as a number of new Expeditions join us in the Plants section, and new sections for Aquatics and Fossils are launched, all in time for the 3-day WeDig Bio event that launched today!
Starting in Australia….
It all kicked off at the Australian Museum, where the DigiVol team gathered a group of volunteers to spend the day transcribing some fascinating specimens – check out their projects here: https://www.wedigbio.org/content/digivol. You can help out with these projects at any time, or if that’s your corner of the world, why not join them on Saturday for a great chance to hang-out with others interested in Biodiversity Collections around the world?
….over to Europe – live in London at the time of writing ….
As the planet turned, we were handed the baton here in London at the Natural History Museum, where we have a team of Visiteers joining us in our Specimen Preparation Area in the Cocoon, helping us to transcribe our ‘Killer Within’ chalcid slides. These tiny wasps are parasitoids, meaning they lay their eggs inside other insects.
When chalcid eggs hatch, the emerging larvae eat the inside of their host. They then grow and pupate until mature enough to burst out as adults, finally killing the host. These tiny creatures play a very important role as biological control agents – they are the natural enemy of a wide range of insect pests that damage our food crops, thus reducing the need for chemicals and pesticides, and saving a significant amount of money as well. You can join us too!
Primulaceae from Royal Botanic Gardens Kew
The tropical Primulaceae form a species-rich but poorly known group. Research at Kew aims to further understand the taxonomy, evolution and diversification of the family to mirror our understanding of the temperate Primulaceae. When thinking of Primulaceae, most of us will picture the spring flowers primroses and cowslips.
These are not only charismatic wild flowers but are also important in horticulture. Traditionally, Primulaceae contained only temperate herbaceous groups and whilst known to be very closely related to Myrsinaceae, was kept separate, primarily on account of Myrsinaceae being woody and tropical. However, based on a suite of similar morphological characters and more recent DNA evidence, all species of Myrsinaceae have been placed in Primulaceae. Come take a look!
Amaranthaceae from the Botanischer Garten Berlin
And just a short trip down to the European continent, we are joined by the Botanischer Garten und Botanisches Museum Berlin, and their newly launched Amaranthaceae Expedition in the Herbarium.
These plants represent the most species-rich lineage within the flowering plant order of Caryophyllales, and are economically important to study because they include vegetables such as spinach (Spinacia oleracea) or forms of beet (Beta vulgaris) (beetroot, chard), and ‘pseudocereals’ such as lamb’s quarters (Chenopodium berlandieri), quinoa (Chenopodium quinoa) and kañiwa (Chenopodium pallidicaule).
A number of species are popular garden ornamental plants, (such as Alternanthera, Amaranthus, Celosia, and Iresine), others are considered weeds (such as redroot pigweed (Amaranthus retroflexus) and alligatorweed (Alternanthera philoxeroides)), and many others cause pollen allergies.
Up Next: North America
Where will you visit? What projects will you join?
Now it’s your turn!
Your help transcribing these specimen labels will allow many more scientists around the world to study the mechanisms of their evolution and investigate biological diversity around the world.
It is essential to link information about organisms and specimens in the collections, to secure this data sustainably and to make it widely accessible and usable. You are helping us to make these collections accessible around the world, and this important information on biodiversity available to everyone.
Many of the Expeditions on Notes from Nature are taking part in the upcoming WeDig Bio event from the 20th to the 23rd of October. It’s all about digitising natural history collections around the world, and we’ll be hosting live events at our home institutions, as well as inviting others to join us online.
It will be a great opportunity to meet other natural history enthusiasts face-to-face (check out the event listing to find one near you), or engage with other volunteers online who will be helping us to transcribe specimen information to set the data free!
For members of the Notes from Nature community there will be plenty of your favourite projects to choose from, plus a number of new ones that are launching just for the occasion.
Miniature Lives Magnified from the Natural History Museum
The collection that the Natural History Museum is profiling as part of WeDigBio focuses on a group of wasps called chalcids (pronounced ‘kal-sids’). These tiny wasps are parasitoids, meaning they lay their eggs inside other insects. When chalcid eggs hatch, the emerging larvae eat the inside of their host. They then grow and pupate until mature enough to burst out as adults, finally killing the host.
These tiny creatures play a very important role as biological control agents – they are the natural enemy of a wide range of insect pests that damage our food crops, thus reducing the need for chemicals and pesticides, and saving a significant amount of money as well.
We have imaged 100,000 microscope slides of these tiny insects, barely visible to the naked eye. Now we need your help to transcribe information from the specimen labels so that the data can be used for scientific research.
This ‘Miniature Lives Magnified‘ project is part of our mission to mobilise the world’s natural history collections, and digitise the 80 million specimens we hold in our collection. at the Natural History Museum. We want to make the information the specimens contain about the natural world more openly available to scientists and the public – and you can help make this happen!
Other Notes from Nature projects taking part:
On Friday the 30th of September, from 16.00 – 22.00, the Natural History Museum in South Kensington London will be hosting our annual festival of science as part of European Researchers’ Night. The theme is Uncovering the hidden worlds of nature – from the depths of the oceans to planets beyond our own – and the Miniature Lives Magnified team at the museum will be showing off our Chalcids!
“Beyond our sight: using the latest technology, scientists can reveal the natural world in more detail than ever before. From bacteria to bioacoustics, learn how microscopic details are helping us understand our future challenges.”
The event is free to attend, and is a wonderful chance to discover rare items from the Museum’s collections, meet hundreds of experts, and take part in interactive science stations, debates and behind-the-scenes tours. You can find out more about the event on the Museum Website.
The team will have a range of slides from our Collection that are being used in our The Killer Within Expedition, which focuses on a group of wasps called chalcids (pronounced ‘cal-sids’). These tiny wasps are parasitoids, meaning they lay their eggs inside other insects. When chalcid eggs hatch the emerging larvae eat the inside of their host. They then grow and pupate until mature enough to burst out as adults, finally killing the host.
Almost invisible to the naked eye the insects in this project inhabit a little known world we rarely notice, but their lifestyles have a huge impact on nature and our human lives. Whilst some insects are vital for pollinating our crops or providing food to higher levels of the food chain, the insects in this project are terrors, either as pests causing destruction to our crop plants through their feeding, or as parasitoids killing these pest species by hatching out of their bodies.
By helping us to transcribe some of the 6286 microscope slides we have in the collection, you are making data and information available to scientists worldwide that can help address some of the key environmental issues we are facing right now, such as sustainable agriculture, the impacts of climate change, and how diseases affect wildlife and humans.
All data transcribed by the expedition will be made freely available for anyone to use on the Museum’s open Data Portal (http://data.nhm.ac.uk).
Come meet the Notes from Nature team at Science Uncovered in the Birds Gallery (Green Zone) of the Natural History Museum:
Welcome to Miniature Lives Magnified!
Here at the Natural History Museum, London, we are so excited to bring you a brand new expedition group focusing on the transcription of microscope slides.
We have taken images of 100,000 microscope slides of a variety of insects, many of which are invisible to the naked eye. We’ll be releasing the images of these insects in small batches.
Our first expedition is called ‘The Killer Within: Wasps but not as you know them’ and focuses on a group of tiny wasps called Chalcids, pronounced ‘kal-cids’. Just millimetres in length these wasps are parasitoids; they lay their eggs inside other insects and the emerging larvae eat their host inside out, growing and pupating until they are mature enough to burst out as adults.
But the gruesome killing habits of Chalcids have an advantageous role in our food production systems. Many of the host species of Chalcids are plant pests that have devastating impacts on agricultural and so Chalcids are used commercially as a biological control agent.
Being sooooo tiny Chalcids are really hard to study, which means there are huge gaps in our knowledge about their ecology and behaviour. We want to start unlocking some of that knowledge from our collections, which is why we have brought the slides to you the Notes from Nature community.
To get stuck into our first batch of microscope slides visit the ‘Magnified’ group, indicated by the microscope icon.
And do let us know what you think of the project in the ‘Magnified Help’ talk group.
We hope you enjoy the slides and we’ll see you in Talk.
Best wishes from Jade and the Natural History Museum team.
The Valdosta State University Herbarium is a museum-quality collection preserving more than 65,000 dried plant specimens useful in research and teaching. The VSU Herbarium, a unit of the Biology Department of Valdosta State University and the second largest herbarium in Georgia, is a rich repository of data emphasizing the diverse flora of the coastal plain region of Georgia and, more generally, the flora of the southeastern United States. In addition to this geographic focus, the VSU Herbarium has taxonomic specialization beyond the southeastern region, with extensive holdings of sedges (Cyperaceae) and other graminoid families, and bryophytes (mosses).
Plant specimens in herbaria are the basis for the knowledge about where and when plants grow and their physical characteristics. Herbarium specimens and associated data are standards for the application of plant names and are widely used by scientists as a basis for the descriptions and distributional maps in specialized literature related to plants. Consequently, they are an essential resource for anyone who needs plant names consistently and accurately derived. The herbarium is also employed extensively to document the locations of rare species and how their populations change over time. Data from herbaria are now being used to study shifts in the timing of reproductive patterns (flowering and fruiting) of plants relating to climate change. Thus, herbarium specimens and data are useful to a variety of scientific researchers, not only botanists, but also ecologists, agricultural scientists and natural resource managers. The VSU Herbarium is used intensively in research and teaching at Valdosta State University, and it provides materials used by researchers at other institutions through lending and exchange of specimens.
Although it originated in the 1930s as a teaching resource of several hundred specimens collected by Professor Beatrice Nevins, the VSU Herbarium was founded as a research collection in 1967 by Professor Wayne R. Faircloth. In addition to Faircloth’s specimens, the VSU Herbarium includes significant collections of Charles Bryson, Richard Carter, Delzie Demaree, Robert Godfrey, Robert Kral, and Sidney McDaniel. Since 1984, the VSU herbarium has more than doubled in size, growing at the rate of 1000-2000 specimens per year. In 2001, the VSU Herbarium occupied new quarters with about 1500 sq. ft., more than twice the space of the old facility, and a modern dedicated climate control system with the capacity to maintain relative humidity below 60%. Additional information about the VSU Herbarium can be found here. Through support from the National Science Foundation, all of accessions in the VSU Herbarium have been imaged, and we are currently building a database of label data from these specimens. Through a local collaborative effort with the VSU Odum Library, many of these images are currently available on-line at http://herb.valdosta.edu.
The VSU Herbarium needs your help in building this database!
–Richard Carter, Director of the Valdosta State University Herbarium
iDigBio and Zooniverse’s Notes from Nature Project are pleased to invite you to participate in a hackathon to further enable public participation in online transcription of biodiversity specimen labels. The event will occur from December 16-20, 2013, at iDigBio in Gainesville, FL, though you may choose to participate in a subset of the days based upon the schedule. We are especially looking for participation from the most enthusiastic and committed citizen science transcribers! This is a great opportunity to have a direct influence on expanding this tool in the directions you would like to see it go.
The hackathon will produce new functionality and interoperability for Zooniverse’s Notes from Nature and similar transcription tools. There are four areas of development that will be progressively addressed throughout the week.
- Linking images registered to the iDigBio Cloud with transcription tools in order to alleviate storage issues. (Monday)
- Transcription QA/QC and the reconciliation of replicate transcriptions. (Remainder of week)
- Integration of OCR into the transcription workflow. (Remainder of week)
- New UI features and novel incentive approaches for public engagement. (Remainder of week)
There will be opportunities to narrow the focus in each category of activity in a teleconference tentatively scheduled for early in the week of November 25 (and also at the TDWG meeting and the iDigBio Summit, if you are attending either of those events).
If you are interested, please get in touch with Austin Mast (firstname.lastname@example.org) by Wednesday, Nov 1. iDigBio has budgeted some funds to support travel costs.
With best regards,
Austin and Rob Guralnick (UC-Boulder), co-organizers